Yayınlar & Eserler

Yayın Ağı

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

A Deep Learning-based Integrated Framework for Quality-aware Undersampled Cine Cardiac MRI Reconstruction and Analysis

Machado I., Puyol-Anton E., Hammernik K., Cruz G., Ugurlu D., Olakorede I., et al.
IEEE Transactions on Biomedical Engineering , cilt.71, sa.3, ss.855-865, 2024 (SCI-Expanded) Creative Commons License identifier identifier

Anatomically guided self-adapting deep neural network for clinically significant prostate cancer detection on bi-parametric MRI: a multi-center study

Karagoz A., Alis D., Seker M. E., Zeybel G., Yergin M., Öksüz İ., et al.
Insights into Imaging , cilt.14, sa.1, 2023 (SCI-Expanded) identifier identifier

Automated LVO detection and collateral scoring on CTA using a 3D self-configuring object detection network: a multi-center study

Bagcilar O., ALİS D. C., Alis C., Seker M. E., Yergin M., Ustundag A., et al.
Scientific Reports , cilt.13, sa.1, 2023 (SCI-Expanded) identifier identifier

Deep learning for assessing image quality in bi-parametric prostate MRI: A feasibility study

ALİS D. C., Kartal M. S., Seker M. E., Guroz B., Basar Y., Arslan A., et al.
European Journal of Radiology , cilt.165, 2023 (SCI-Expanded) identifier identifier

Transfer learning for electricity price forecasting

Gunduz S., Ugurlu U., Öksüz İ.
Sustainable Energy, Grids and Networks , cilt.34, 2023 (SCI-Expanded) Creative Commons License identifier

A Hybrid Fusion Method Combining Spatial Image Filtering with Parallel Channel Network for Retinal Vessel Segmentation

Yakut C., Öksüz İ., ULUKAYA S.
ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING , cilt.48, sa.5, ss.6149-6162, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Block Attention and Switchable Normalization based Deep Learning Framework for Segmentation of Retinal Vessels

Deari S., Öksüz İ., ULUKAYA S.
IEEE Access , cilt.11, ss.38263-38274, 2023 (SCI-Expanded) Creative Commons License identifier

A Survey on Shape-Constraint Deep Learning for Medical Image Segmentation

Bohlender S., Öksüz İ., Mukhopadhyay A.
IEEE Reviews in Biomedical Engineering , cilt.16, ss.225-240, 2023 (SCI-Expanded) Creative Commons License identifier identifier identifier

A Topological Loss Function for Deep-Learning Based Image Segmentation Using Persistent Homology

Clough J. R., Byrne N., Öksüz İ., Zimmer V. A., Schnabel J. A., King A. P.
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE , cilt.44, sa.12, ss.8766-8778, 2022 (SCI-Expanded) Creative Commons License identifier identifier identifier identifier

Channel Attention Networks for Robust MR Fingerprint Matching

Soyak R., Navruz E., Ersoy E. O., Cruz G., Prieto C., King A. P., et al.
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING , cilt.69, sa.4, ss.1398-1405, 2022 (SCI-Expanded) identifier identifier identifier

Neural network dose prediction for rectal spacer stratification in dose-escalated prostate radiotherapy

Thomas C., Dregely I., Öksüz İ., Urbano T. G., Greener T., King A. P., et al.
MEDICAL PHYSICS , cilt.49, sa.4, ss.2172-2182, 2022 (SCI-Expanded) identifier identifier identifier

A joint convolutional-recurrent neural network with an attention mechanism for detecting intracranial hemorrhage on noncontrast head CT

ALİS D. C., Alis C., Yergin M., Topel C., Asmakutlu O., Bagcilar O., et al.
SCIENTIFIC REPORTS , cilt.12, sa.1, 2022 (SCI-Expanded) Creative Commons License identifier identifier identifier

Left Ventricle Quantification Challenge: A Comprehensive Comparison and Evaluation of Segmentation and Regression for Mid-Ventricular Short-Axis Cardiac MR Data

Xue W., Li J., Hu Z., Kerfoot E., Clough J., Oksuz I., et al.
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS , cilt.25, sa.9, ss.3541-3553, 2021 (SCI-Expanded) identifier identifier identifier

Inter-vendor performance of deep learning in segmenting acute ischemic lesions on diffusion-weighted imaging: a multicenter study

ALİS D. C., Yergin M., ALİŞ C., Topel C., Asmakutlu O., Bagcilar O., et al.
SCIENTIFIC REPORTS , cilt.11, sa.1, 2021 (SCI-Expanded) identifier identifier identifier

Brain MRI artefact detection and correction using convolutional neural networks

Öksüz İ.
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE , cilt.199, 2021 (SCI-Expanded) identifier identifier identifier

Comparison of machine learning methods for prediction of osteoradionecrosis incidence in patients with head and neck cancer

Humbert-Vidan L., Patel V., Oksuz I., King A. P., Urbano T. G.
BRITISH JOURNAL OF RADIOLOGY , cilt.94, sa.1120, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Deep Learning-Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation

Öksüz İ., Clough J. R., Ruijsink B., Anton E. P., Bustin A., Cruz G., et al.
IEEE TRANSACTIONS ON MEDICAL IMAGING , cilt.39, sa.12, ss.4001-4010, 2020 (SCI-Expanded) identifier identifier identifier

A multi-scale variational neural network for accelerating motion-compensated whole-heart 3D coronary MR angiography

Fuin N., Bustin A., Kustner T., Öksüz İ., Clough J., King A. P., et al.
MAGNETIC RESONANCE IMAGING , cilt.70, ss.155-167, 2020 (SCI-Expanded) identifier identifier identifier

Fully Automated, Quality-Controlled Cardiac Analysis From CMR Validation and Large-Scale Application to Characterize Cardiac Function

Ruijsink B., Puyol-Antón E., Oksuz İ., Sinclair M., Bai W., Schnabel J., et al.
JACC-CARDIOVASCULAR IMAGING , cilt.13, sa.3, ss.684-695, 2020 (SCI-Expanded) identifier identifier identifier

An objective comparison of detection and segmentation algorithms for artefacts in clinical endoscopy

Ali S., Zhou F., Braden B., Bailey A., Yang S., Cheng G., et al.
SCIENTIFIC REPORTS , cilt.10, sa.1, 2020 (SCI-Expanded) identifier identifier identifier

Neural Network Based Model Comparison for Intraday Electricity Price Forecasting

Oksuz İ., Ugurlu U.
ENERGIES , cilt.12, sa.23, 2019 (SCI-Expanded) identifier identifier

Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning

Oksuz İ., Ruijsink B., Puyol-Anton E., Clough J. R., Cruz G., Bustin A., et al.
MEDICAL IMAGE ANALYSIS , cilt.55, ss.136-147, 2019 (SCI-Expanded) identifier identifier identifier

Accurate needle-free assessment of myocardial oxygenation for ischemic heart disease in canines using magnetic resonance imaging

Yang H., Oksuz İ., Dey D., Sykes J., Klein M., Butler J., et al.
SCIENCE TRANSLATIONAL MEDICINE , cilt.11, sa.494, 2019 (SCI-Expanded) Creative Commons License identifier identifier identifier

The Financial Effect of the Electricity Price Forecasts' Inaccuracy on a Hydro-Based Generation Company

Ugurlu U., Taş O., Kaya A., Oksuz İ.
ENERGIES , cilt.11, sa.8, 2018 (SCI-Expanded) identifier identifier

Electricity Price Forecasting Using Recurrent Neural Networks

Ugurlu U., Oksuz İ., Tas O.
ENERGIES , cilt.11, sa.5, 2018 (SCI-Expanded) identifier identifier

Statistical Shape Modeling of the Left Ventricle: Myocardial Infarct Classification Challenge

Suinesiaputra A., Ablin P., Alba X., Alessandrini M., Allen J., Bai W., et al.
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS , cilt.22, sa.2, ss.503-515, 2018 (SCI-Expanded) identifier identifier identifier

Unsupervised Myocardial Segmentation for Cardiac BOLD

Oksuz İ., Mukhopadhyay A., Dharmakumar R., Tsaftaris S. A.
IEEE TRANSACTIONS ON MEDICAL IMAGING , cilt.36, sa.11, ss.2228-2238, 2017 (SCI-Expanded) Creative Commons License identifier identifier identifier

Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study

Rudyanto R. D., Kerkstra S., van Rilowort E. M., Fetita C., Brillet P., Lefevre C., et al.
MEDICAL IMAGE ANALYSIS , cilt.18, sa.7, ss.1217-1232, 2014 (SCI-Expanded) identifier identifier identifier

Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography

Kirisli H. A., SCHAAP M., METZ C. T., DHARAMPAL A. S., MEIJBOOM W. B., PAPADOPOULOU S. L., et al.
MEDICAL IMAGE ANALYSIS , cilt.17, sa.8, ss.859-876, 2013 (SCI-Expanded) identifier identifier identifier

Diğer Dergilerde Yayınlanan Makaleler

Super-resolution with generative adversarial networks for improved object detection in aerial images

Haykir A. A., Öksüz İ.
INFORMATION DISCOVERY AND DELIVERY , cilt.51, sa.4, ss.349-357, 2023 (ESCI) identifier identifier

DGM4MICCAI 2022 Preface

Mukhopadhyay A., Öksüz İ., Engelhardt S., Zhu D., Yuan Y.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) , cilt.13609 LNCS, 2022 (Scopus) identifier

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Detection and correction of cardiac MRI motion artefacts during reconstruction from k-space

ÖKSÜZ İ., Clough J. R., Ruijsink B., Puyol-Anton E., Bustin A., Cruz G., et al.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 13 - 17 Ekim 2019, cilt.11767, ss.695 Sürdürülebilir Kalkınma identifier identifier

Global and local interpretability for cardiac MRI classification

Clough J. R., ÖKSÜZ İ., Puyol-Anton E., Ruijsink B., King A. P., Schnabel J. A.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 13 - 17 Ekim 2019, cilt.11767, ss.656 identifier identifier

Mechanically Powered Motion Imaging Phantoms: Proof of Concept

Gomez A., schmitz C., henningson m., Housden J., Noh Y., Zimmer V. A., et al.
2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Berlin, Germany, 23 - 27 Temmuz 2019, cilt.2019, ss.2723-2726 identifier identifier identifier

MAGNETIC RESONANCE FINGERPRINTING USING RECURRENT NEURAL NETWORKS

ÖKSÜZ İ., Cruz G., Clough J. R., Bustin A., Fuin N., Botnar R., et al.
2019 IEEE 16TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI 2019), Venice, İtalya, 8 - 11 Nisan 2019, ss.1537-1540 identifier identifier

Explicit Topological Priors for Deep-Learning Based Image Segmentation Using Persistent Homology

Clough J. R., ÖKSÜZ İ., Bryne N., Schnabel J. A., King A. P.
INFORMATION PROCESSING IN MEDICAL IMAGING, IPMI 2019, Hong Kong, 2 - 07 Haziran 2019 identifier identifier

Artefact detection in video endoscopy using retinanet and focal loss function

ÖKSÜZ İ., Clough J. R., King A. P., Schnabel J. A.
CEUR Workshop Proceedings, 08 Nisan 2019, cilt.2366 identifier

Left-Ventricle Quantification Using Residual U-Net

Kerfoot E., Clough J. R., ÖKSÜZ İ., Lee J., King A. P., Schnabel J. A.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 16 Eylül 2018, cilt.11395, ss.371 identifier

Deep learning using K-space based data augmentation for automated cardiac MR motion artefact detection

ÖKSÜZ İ., Ruijsink B., Puyol-Anton E., Bustin A., Cruz G., Prieto C., et al.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 16 - 20 Eylül 2018, cilt.11070, ss.250 identifier identifier

Cardiac MR Motion Artefact Correction from K-space Using Deep Learning-Based Reconstruction

ÖKSÜZ İ., Clough J. R., Bustin A., Cruz G., Prieto C., Botnar R., et al.
MACHINE LEARNING FOR MEDICAL IMAGE RECONSTRUCTION, MLMIR 2018, Granada, Nikaragua, 16 Eylül 2018, cilt.11074, ss.21-29 identifier identifier

AUTOMATIC LEFT VENTRICULAR OUTFLOW TRACT CLASSIFICATION FOR ACCURATE CARDIAC MR PLANNING

ÖKSÜZ İ., Ruijsink B., Puyol-Anton E., Sinclair M., Rueckert D., Schnabel J. A., et al.
2018 IEEE 15TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI 2018), Washington, Kiribati, 4 - 07 Nisan 2018, ss.462-465 identifier identifier

Joint myocardial registration and segmentation of cardiac BOLD MRI

ÖKSÜZ İ., Dharmakumar R., Tsaftaris S. A.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 10 Eylül 2017, cilt.10663, ss.12 identifier

MRI-TRUS Image Synthesis with Application to Image-Guided Prostate Intervention

Onofrey J., ÖKSÜZ İ., Sarkar S., Venkataraman R., Staib L. H., Papademetris X.
SIMULATION AND SYNTHESIS IN MEDICAL IMAGING, SASHIMI 2016, Athens, Yunanistan, 21 Ekim 2016 identifier identifier

Towards joint segmentation and registration of the myocardium in CP-BOLD MRI at rest

ÖKSÜZ İ., Dharmakumar R., Tsaftaris S. A.
Journal of Cardiovascular Magnetic Resonance, 27 - 30 Ocak 2016, cilt.18, ss.34

BOLD contrast: A challenge for cardiac image analysis

ÖKSÜZ İ., Marco B., Mukhopadhyay A., Dharmakumar R., Tsaftaris S. A.
Journal of Cardiovascular Magnetic Resonance, 27 - 30 Ocak 2016, cilt.18, ss.27

Supervised learning of functional maps for infarct classification

Mukhopadhyay A., ÖKSÜZ İ., Tsaftaris S. A.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5 - 09 Ekim 2015, cilt.9534, ss.162 identifier

Unsupervised Myocardial Segmentation for Cardiac MRI

Mukhopadhyay A., ÖKSÜZ İ., Marco B., Dharmakumar R., Tsaftaris S. A.
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, PT III, Munich, Almanya, 5 - 09 Ekim 2015, cilt.9351, ss.12-20 identifier identifier

Dictionary Learning Based Image Descriptor for Myocardial Registration of CP-BOLD MR

ÖKSÜZ İ., Mukhopadhyay A., Marco B., Dharmakumar R., Tsaftaris S. A.
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2015, PT II, Munich, Almanya, 5 - 09 Ekim 2015, cilt.9350, ss.205-213 identifier identifier

Data-Driven Feature Learning for Myocardial Segmentation of CP-BOLD MRI

Mukhopadhyay A., ÖKSÜZ İ., Marco B., Dharmakumar R., Tsaftaris S. A.
FUNCTIONAL IMAGING AND MODELING OF THE HEART (FIMH 2015), Maastricht, Hollanda, 25 - 27 Haziran 2015, cilt.9126, ss.189-197 identifier identifier

REGION GROWING ON FRANGI VESSELNESS VALUES IN 3-D CTA DATA

ÖKSÜZ İ., ÜNAY D., KADIPAŞAOĞLU A. K.
2013 21ST SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS CONFERENCE (SIU), Türkiye, 24 - 26 Nisan 2013

Automated Aortic Supravalvular Sinus Detection in Conventional Computed Tomography Image

ÜNAY D., Harmankaya i., ÖKSÜZ İ., KADIPAŞAOĞLU A. K., ÇUBUK R., ÇELİK L.
2013 21ST SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS CONFERENCE (SIU), 24 - 26 Nisan 2013 identifier

Metrikler

Yayın

70

Atıf (WoS)

673

H-İndeks (WoS)

13

Atıf (Scopus)

1262

H-İndeks (Scopus)

17

Proje

5

Açık Erişim

8
BM Sürdürülebilir Kalkınma Amaçları