PathCase-SB architecture and database design

Cakmak A. , Qi X., Coskun S. A. , Das M., Cheng E., Cicek A. E. , ...More

BMC SYSTEMS BIOLOGY, vol.5, 2011 (Journal Indexed in SCI) identifier identifier identifier

  • Publication Type: Article / Article
  • Volume: 5
  • Publication Date: 2011
  • Doi Number: 10.1186/1752-0509-5-188
  • Title of Journal : BMC SYSTEMS BIOLOGY


Background: Integration of metabolic pathways resources and regulatory metabolic network models, and deploying new tools on the integrated platform can help perform more effective and more efficient systems biology research on understanding the regulation in metabolic networks. Therefore, the tasks of (a) integrating under a single database environment regulatory metabolic networks and existing models, and (b) building tools to help with modeling and analysis are desirable and intellectually challenging computational tasks.